CancerMutationMCMC is a R package for estimating somatic mutation
rates and classifying driver and passenger genes in cancer. It is
described in the paper:
"Hierarchical Bayesian Analysis of Somatic Mutation Data in Cancer",
Jie Ding, Lorenzo Trippa, Xiaogang Zhong and Giovanni Parmigiani.
The package with source code can be download
here. A compiled version
for Windows will be available later.
A short instruction can be download here
with a sample input data here.
A sample R script for the analysis of the pancreatic cancer data from
Jones et al (2008) is available here.