SuppTable 11a: MicroRNAs associated with mortality risk for early stage squamous cell carcinoma in male smokers

Table 2. Thirty-four miRs that significantly (at P < 0.0001) differentiate adenocarcinoma from SQ samples in male smoker patients (n = 205)

SuppTable 11b: MicroRNAs associated with mortality risk for early stage squamous cell carcinoma in male smokers

Table 3. Correlation between miRs differentiating adenocarcinoma from SQ and mRNA expression of predicted target genes

Supplementary Table 1:The list of 184 biomarkers for training a COXEN gene expression model for
cyclophosphamide.

Supplementary Table 1:The list of 23 biomarkers for training a COXEN gene expression model for 5-
fluorouracil.

Supplementary Table 1:The list of 25 biomarkers for training a COXEN gene expression model for Paclitaxel.

Supplementary Table 1:The list of probe sets included in the DLDA30 predictor.

Supplementary Table 1:The list of 52 biomarkers for training a COXEN gene expression model for doxorubicin.

Table S5. Differentially expressed genes as assessed by multi-SAM analysis between M IGHV3-23 and M non-IGHV3-23 CLL

SuppTable 4. One hundred eighty-four of 10 986 genes were located in genomic regions  identified by SIRAC  that were associated with a 70-gene good prognosis signature.

SuppTable 3. Two hundred seventy-one of the 10 986 genes were located in genomic regions  identified by SIRAC  which were associated with a 70-gene poor prognosis signature.

Supplementary Table S5. Common genes found as the candidates for CRC metastasis when cross-comparing differential genes expressed between SCP51 and SCP58 cells with the differential genes found between SCP58 and SW480/EGFP

Supplementary Table S4. The differential genes between SW480/EGFP and SCP58 (SW480/EGFP vs. SCP58)

Supplementary Table S3. The differential genes between SCP51 and SCP58 cells (SCP51 vs. SCP58 )

Supplementary Table S7. Genes found in the top ten clusters using gene-annotation enrichment analysis of DAVID

Additional file 6 - Interaction confidence predicted by HEFalMp/Graphle between the core genes in each group (z-score > 2)