Univariable Cox's proportional hazards model analysis of expression levels of five genes for progression-free survival and overall survival in patients with advanced stage serous ovarian cancers. Validation Set

SUPP. TABLE III.  Probes expressed 50-fold higher (p<0.05) in primary epithelial cells

SUPP. TABLE IV. A list of probes altered in primary epithelial cells after 15 ?M sulforaphane (SF) treatment over 24 h (196 probes).

SUPP. TABLE VII.   A list of probes altered in primary stromal cells after 15 ?M IB treatment  over 24 h (259 probes).

SUPP. TABLE II. Probes expressed 50-fold higher (p<0.05) in primary stromal cells

SUPP. TABLE VI. A list of probes altered in primary stromal cells after 15?M sulforaphane (SF) treatment over 24 h (42 probes).

SUPP. TABLE V.   A list of probes altered in primary epithelial cells after 15 ?M IB treatment over 24 h (47 probes).

Additional file 2 Genes significantly regulated by radiotherapy in Humanlymphocytes.

Figure 1(a) Expression patterns of Alu-associated microRNAs (miRNAs) in Humangastric cancer cells treated with 5-aza-20-deoxycytidine (5-Aza-CdR) and 4-phenylbutyric acid (PBA); miRNAs upregulated by 5-Aza-CdR and PBA in AGS and T24 cells (microarray analysis).

Supplementary Table 3- Differentially expressed genes in isogenic cisplatin-resistant (Round5) vs. cisplatin sensistive (parental) A2780 epithelial ovarian cancer cells

Table 1. Query signature used for the connectivity map analysis

Table 1. Genes expressed constitutively lower in the lungs of Keap1?2-3/?2-3; CctCre+ compared to Keap1flox/flox mice

Table 1. Genes expressed constitutively higher in the lungs of Keap1?2-3/?2-3; CctCre+ compared to Keap1flox/flox mice

Table 2. 40 most differentially expressed genes between adult GBM biopsies and derived short-term cell cultures and lists the genes and fold changes of those genes found to be differentially expressed by Mehrian et al.

Table 1. 40 most differentially expressed genes between the paeditric PA biopsies and derived short-term cell cultures and lists the genes and fold changes of those genes found to be differentially expressed by Mehrian et al.