Supplementary Table 1-PLAU Gene Module; Tumor invasion gene module; the module was populated by genes being significantly correlated to PLAU a well-known tumor invasion-related gene  as determined by a cross-validation strategy in a meta-analytical framework

Supplementary Table 1-STAT1 Gene Module; Immune response gene module; the module was populated by genes being significantly correlated to STAT1  a well-known immune response-related gene  as determined by a cross-validation strategy in a meta-analytical framework

Supplementary Table 1-VEGF Gene Module; Angiogenesis gene module; the module was populated by genes being significantly correlated to VEGF  a well-known angiogenesis-related gene  as determined by a cross-validation strategy in a meta-analytical framework

Table 1. Gene list focusing on the nuclear factors  and selecting the potentially interesting 27 genes

Table 2. Selected gene expression changes in HL-60 cells treated with 6 Amol/L CHR-2797 or deprived of extracellular amino acids

Table 4. Genes down-regulated during chondrogenic differentiation of MSC spheroids; Mean expression levels of pre-chondrogenic cluster 1 (mean 1) and of chondrogenic cluster 2 (mean 2) and the corresponding ratio (mean1 :mean2) are shown.

Table 3. Genes up-regulated during chondrogenic differentiation of MSC spheroids; Mean expression levels of pre-chondrogenic cluster 1 (mean 1) and of chondrogenic cluster 2 (mean 2) and the corresponding ratio (mean
2 : mean 1) are shown.

Table 2 Complete list of genes differentially expressed in HCT116-XIAP-/- cells relative to HCT116-XIAP+/+ cells (at least 4-fold)

Table 3 Genes related to apoptosis  angiogenesis  and proliferation in HCT116-XIAP-/- cells relative to HCT116-XIAP+/+ cells (more than 4-fold)

Table1 Fold changes of genes related to cell migration  cell adhesion and matrix remodeling as assessed by RMA

Table S3. miR-26a response signature (list of significant gene expression changes following over-expression of miR-26a)

Table 2. EZH2 target gene enrichment in miR-26a-induced gene expression pattern