Example

Probe Symbol Description Chromosome Chromosome Location GenBank Gene Cytoband UniGene PubMed Gene Ontology Pathway
41155_at CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 5 138089107 U03100 5q31.2 Hs.445981 Hs.656653 98

ovarian follicle development

acrosomal vesicle

structural molecule activity

protein binding

cytoplasm

cytosol

plasma membrane

plasma membrane

cell-cell junction

zonula adherens

cell adhesion

establishment or maintenance of cell polarity

negative regulation of neuroblast proliferation

aging

beta-catenin binding

male gonad development

response to organic cyclic compound

actin cytoskeleton

gap junction assembly

catenin complex

vinculin binding

lamellipodium

axon regeneration

cell junction assembly

adherens junction organization

regulation of cell proliferation

odontogenesis of dentine-containing tooth

muscle cell differentiation

negative regulation of apoptosis

apical junction assembly

apical junction assembly

response to estrogen stimulus

cell-cell junction organization

gamma-catenin binding

cadherin binding

cadherin binding

positive regulation of smoothened signaling pathway

actin filament binding

positive regulation of muscle cell differentiation

cellular response to indole-3-methanol

Adherens junction

Tight junction

Leukocyte transendothelial migration

Bacterial invasion of epithelial cells

Pathways in cancer

Endometrial cancer

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

35985_at         AB023137      

enzyme binding

 
39370_at MAP1LC3B microtubule-associated protein 1 light chain 3 beta 16 87425801 W28807 16q24.2 Hs.356061 31

autophagic vacuole membrane

protein binding

intracellular

cytoplasm

autophagic vacuole

cytoskeleton

microtubule

autophagy

endomembrane system

organelle membrane

cytoplasmic vesicle

 
32724_at PHYH phytanoyl-CoA 2-hydroxylase 10 -13319797, -13319797 AF023462 10p13 Hs.498732 33

fatty acid alpha-oxidation

catalytic activity

mitochondrion

peroxisome

peroxisomal matrix

lipid metabolic process

nervous system development

electron carrier activity

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

L-ascorbic acid binding

cellular lipid metabolic process

metal ion binding

phytanoyl-CoA dioxygenase activity

Peroxisome

41438_at OSBPL8 oxysterol binding protein-like 8 12 -76745578 AL049923 12q14 Hs.430849 15

transport

lipid transport

lipid binding

 
32666_at CXCL12 chemokine (C-X-C motif) ligand 12 10 -44872511, -44871315, -44865607 U19495 10q11.1 Hs.522891 608

signal transducer activity

receptor binding

extracellular region

extracellular region

extracellular space

cellular calcium ion homeostasis

chemotaxis

immune response

cell adhesion

signal transduction

G-protein coupled receptor protein signaling pathway

chemokine activity

blood circulation

regulation of actin polymerization or depolymerization

growth factor activity

response to virus

negative regulation of apoptosis

CXCR chemokine receptor binding

chemokine-mediated signaling pathway

positive regulation of monocyte chemotaxis

negative regulation of leukocyte apoptosis

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Axon guidance

Leukocyte transendothelial migration

Intestinal immune network for IgA production

Rheumatoid arthritis

41260_at DDX17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 22 -38879445, -38879445 U59321 22q13.1 Hs.528305 Hs.725500 37

nucleotide binding

nucleic acid binding

RNA binding

RNA helicase activity

helicase activity

ATP binding

nucleus

RNA processing

ATP-dependent helicase activity

RNA-dependent ATPase activity

hydrolase activity

 
41271_at SLC7A8 solute carrier family 7 (amino acid transporter light chain, L system), member 8 14 -23594506, -23594506 Y18483 14q11.2 Hs.596643 22

amino acid transmembrane transport

amino acid transmembrane transport

amino acid transmembrane transport

protein binding

cytoplasm

plasma membrane

plasma membrane

integral to plasma membrane

cellular amino acid metabolic process

transport

ion transport

amino acid transport

amino acid transport

blood coagulation

response to toxin

organic cation transmembrane transporter activity

amino acid transmembrane transporter activity

amino acid transmembrane transporter activity

amino acid transmembrane transporter activity

neutral amino acid transmembrane transporter activity

L-amino acid transmembrane transporter activity

organic cation transport

neutral amino acid transport

neutral amino acid transport

basolateral plasma membrane

toxin transporter activity

cellular nitrogen compound metabolic process

peptide antigen binding

leukocyte migration

metal ion homeostasis

transmembrane transport

Protein digestion and absorption

32043_at STC2 stanniocalcin 2 5 -172741726 AF098462 5q35.1 Hs.233160 27

hormone activity

extracellular region

cell surface receptor linked signaling pathway

cell-cell signaling

embryo implantation

response to nutrient

response to vitamin D

response to peptide hormone stimulus

decidualization

cellular response to hypoxia

 
1323_at UBB ubiquitin B 17 16284367 X04803 17p12-p11.2 Hs.356190 170

cell cycle checkpoint

G1/S transition of mitotic cell cycle

S phase of mitotic cell cycle

activation of MAPK activity

protein polyubiquitination

M/G1 transition of mitotic cell cycle

mitotic cell cycle

activation of innate immune response

toll-like receptor signaling pathway

antigen processing and presentation of peptide antigen via MHC class I

MyD88-dependent toll-like receptor signaling pathway

MyD88-independent toll-like receptor signaling pathway

ubiquitin-protein ligase activity

protein binding

nucleus

nucleoplasm

cytoplasm

cytosol

plasma membrane

DNA repair

apoptosis

anti-apoptosis

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

epidermal growth factor receptor signaling pathway

I-kappaB kinase/NF-kappaB cascade

JNK cascade

Toll signaling pathway

induction of apoptosis by extracellular signals

endosome membrane

viral reproduction

cellular membrane organization

RNA metabolic process

mRNA metabolic process

endosome transport

endocytic vesicle membrane

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of type I interferon production

toll-like receptor 1 signaling pathway

toll-like receptor 2 signaling pathway

toll-like receptor 3 signaling pathway

toll-like receptor 4 signaling pathway

negative regulation of epidermal growth factor receptor signaling pathway

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

innate immune response

nerve growth factor receptor signaling pathway

T cell receptor signaling pathway

positive regulation of NF-kappaB transcription factor activity

stress-activated MAPK cascade

negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle

regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle

nucleotide-binding oligomerization domain containing signaling pathway

Parkinson's disease

32203_at RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 20 388709 AA160708 20p13 Hs.247280 24

protein polyubiquitination

DNA binding

ubiquitin-protein ligase activity

protein kinase C binding

protein binding

intracellular

zinc ion binding

ligase activity

negative regulation of NF-kappaB transcription factor activity

positive regulation of NF-kappaB import into nucleus

positive regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

proteasomal ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

metal ion binding

T cell receptor signaling pathway

positive regulation of NF-kappaB transcription factor activity

LUBAC complex

protein linear polyubiquitination

 
35450_s_at         U77948      

DNA binding

sequence-specific DNA binding transcription factor activity

protein binding

nucleus

cytoplasm

transcription, DNA-dependent

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

signal transduction

negative regulation of angiogenesis

 
38952_s_at COL13A1 collagen, type XIII, alpha 1 10 71561644 M33653 10q22 Hs.695934 22

morphogenesis of a branching structure

endochondral ossification

extracellular matrix structural constituent

protein binding

collagen

collagen type XIII

plasma membrane

cell-cell junction

cell-matrix adhesion

multicellular organismal development

heparin binding

integral to membrane

cell-cell adhesion

cell differentiation

 
39597_at ABLIM3 actin binding LIM protein family, member 3 5 148521054 AB020650 5q32 Hs.49688 15

actin binding

cytoplasm

cytoskeleton organization

axon guidance

zinc ion binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

Axon guidance

36130_f_at MT1E metallothionein 1E 16 56659585 M10942 16q13 Hs.534330 24

copper ion binding

cytoplasm

biological_process

zinc ion binding

cadmium ion binding

metal ion binding

 
33430_at C18orf10 chromosome 18 open reading frame 10 18 -34376034 AA143321 18q12.2 Hs.436636 5

cytoplasm

cytoskeleton

microtubule

 
33235_at NAV3 neuron navigator 3 12 78225069 AB023155 12q14.3 Hs.655301 16

nucleotide binding

ATP binding

nucleus

nuclear outer membrane

membrane

nucleoside-triphosphatase activity

 
39040_at UBE2J1 ubiquitin-conjugating enzyme E2, J1, U 6 -90036345 W28360 6q15 Hs.163776 16

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

ligase activity

acid-amino acid ligase activity

Ubiquitin mediated proteolysis

Protein processing in endoplasmic reticulum

Parkinson's disease

37486_f_at MEIS3P1 Meis homeobox 3 pseudogene 1 17 15690164 U68385 17p12 Hs.356135 4

sequence-specific DNA binding transcription factor activity

nucleus

sequence-specific DNA binding

 
757_at ANXA2 annexin A2 15 -60639352, -60639351 D28364 15q22.2 Hs.511605 185

skeletal system development

angiogenesis

phospholipase inhibitor activity

calcium ion binding

protein binding

calcium-dependent phospholipid binding

phosphatidylinositol-4,5-bisphosphate binding

extracellular region

basement membrane

soluble fraction

cytoplasm

early endosome

plasma membrane

body fluid secretion

cytoskeletal protein binding

Rab GTPase binding

extrinsic to plasma membrane

collagen fibril organization

midbody

positive regulation of vesicle fusion

sarcolemma

melanosome

fibrinolysis

protein complex

perinuclear region of cytoplasm

positive regulation of binding

cellular response to acid

 

20 Genes