Probe |
Symbol |
Description |
Chromosome |
Chromosome Location |
GenBank |
Gene |
Cytoband |
UniGene |
PubMed |
Gene Ontology |
Pathway |
41155_at |
CTNNA1 |
catenin (cadherin-associated protein), alpha 1, 102kDa |
5 |
138089107 |
U03100 |
1495 |
5q31.2 |
Hs.445981 Hs.656653 |
98 |
ovarian follicle development acrosomal vesicle structural molecule activity protein binding cytoplasm cytosol plasma membrane plasma membrane cell-cell junction zonula adherens cell adhesion establishment or maintenance of cell polarity negative regulation of neuroblast proliferation aging beta-catenin binding male gonad development response to organic cyclic compound actin cytoskeleton gap junction assembly catenin complex vinculin binding lamellipodium axon regeneration cell junction assembly adherens junction organization regulation of cell proliferation odontogenesis of dentine-containing tooth muscle cell differentiation negative regulation of apoptosis apical junction assembly apical junction assembly response to estrogen stimulus cell-cell junction organization gamma-catenin binding cadherin binding cadherin binding positive regulation of smoothened signaling pathway actin filament binding positive regulation of muscle cell differentiation cellular response to indole-3-methanol |
Adherens junction Tight junction Leukocyte transendothelial migration Bacterial invasion of epithelial cells Pathways in cancer Endometrial cancer Arrhythmogenic right ventricular cardiomyopathy (ARVC) |
35985_at |
|
|
|
|
AB023137 |
|
|
|
|
enzyme binding |
|
39370_at |
MAP1LC3B |
microtubule-associated protein 1 light chain 3 beta |
16 |
87425801 |
W28807 |
81631 |
16q24.2 |
Hs.356061 |
31 |
autophagic vacuole membrane protein binding intracellular cytoplasm autophagic vacuole cytoskeleton microtubule autophagy endomembrane system organelle membrane cytoplasmic vesicle |
|
32724_at |
PHYH |
phytanoyl-CoA 2-hydroxylase |
10 |
-13319797, -13319797 |
AF023462 |
5264 |
10p13 |
Hs.498732 |
33 |
fatty acid alpha-oxidation catalytic activity mitochondrion peroxisome peroxisomal matrix lipid metabolic process nervous system development electron carrier activity oxidoreductase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen L-ascorbic acid binding cellular lipid metabolic process metal ion binding phytanoyl-CoA dioxygenase activity |
Peroxisome |
41438_at |
OSBPL8 |
oxysterol binding protein-like 8 |
12 |
-76745578 |
AL049923 |
114882 |
12q14 |
Hs.430849 |
15 |
transport lipid transport lipid binding |
|
32666_at |
CXCL12 |
chemokine (C-X-C motif) ligand 12 |
10 |
-44872511, -44871315, -44865607 |
U19495 |
6387 |
10q11.1 |
Hs.522891 |
608 |
signal transducer activity receptor binding extracellular region extracellular region extracellular space cellular calcium ion homeostasis chemotaxis immune response cell adhesion signal transduction G-protein coupled receptor protein signaling pathway chemokine activity blood circulation regulation of actin polymerization or depolymerization growth factor activity response to virus negative regulation of apoptosis CXCR chemokine receptor binding chemokine-mediated signaling pathway positive regulation of monocyte chemotaxis negative regulation of leukocyte apoptosis |
Cytokine-cytokine receptor interaction Chemokine signaling pathway Axon guidance Leukocyte transendothelial migration Intestinal immune network for IgA production Rheumatoid arthritis |
41260_at |
DDX17 |
DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 |
22 |
-38879445, -38879445 |
U59321 |
10521 |
22q13.1 |
Hs.528305 Hs.725500 |
37 |
nucleotide binding nucleic acid binding RNA binding RNA helicase activity helicase activity ATP binding nucleus RNA processing ATP-dependent helicase activity RNA-dependent ATPase activity hydrolase activity |
|
41271_at |
SLC7A8 |
solute carrier family 7 (amino acid transporter light chain, L system), member 8 |
14 |
-23594506, -23594506 |
Y18483 |
23428 |
14q11.2 |
Hs.596643 |
22 |
amino acid transmembrane transport amino acid transmembrane transport amino acid transmembrane transport protein binding cytoplasm plasma membrane plasma membrane integral to plasma membrane cellular amino acid metabolic process transport ion transport amino acid transport amino acid transport blood coagulation response to toxin organic cation transmembrane transporter activity amino acid transmembrane transporter activity amino acid transmembrane transporter activity amino acid transmembrane transporter activity neutral amino acid transmembrane transporter activity L-amino acid transmembrane transporter activity organic cation transport neutral amino acid transport neutral amino acid transport basolateral plasma membrane toxin transporter activity cellular nitrogen compound metabolic process peptide antigen binding leukocyte migration metal ion homeostasis transmembrane transport |
Protein digestion and absorption |
32043_at |
STC2 |
stanniocalcin 2 |
5 |
-172741726 |
AF098462 |
8614 |
5q35.1 |
Hs.233160 |
27 |
hormone activity extracellular region cell surface receptor linked signaling pathway cell-cell signaling embryo implantation response to nutrient response to vitamin D response to peptide hormone stimulus decidualization cellular response to hypoxia |
|
1323_at |
UBB |
ubiquitin B |
17 |
16284367 |
X04803 |
7314 |
17p12-p11.2 |
Hs.356190 |
170 |
cell cycle checkpoint G1/S transition of mitotic cell cycle S phase of mitotic cell cycle activation of MAPK activity protein polyubiquitination M/G1 transition of mitotic cell cycle mitotic cell cycle activation of innate immune response toll-like receptor signaling pathway antigen processing and presentation of peptide antigen via MHC class I MyD88-dependent toll-like receptor signaling pathway MyD88-independent toll-like receptor signaling pathway ubiquitin-protein ligase activity protein binding nucleus nucleoplasm cytoplasm cytosol plasma membrane DNA repair apoptosis anti-apoptosis DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest epidermal growth factor receptor signaling pathway I-kappaB kinase/NF-kappaB cascade JNK cascade Toll signaling pathway induction of apoptosis by extracellular signals endosome membrane viral reproduction cellular membrane organization RNA metabolic process mRNA metabolic process endosome transport endocytic vesicle membrane anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process negative regulation of type I interferon production toll-like receptor 1 signaling pathway toll-like receptor 2 signaling pathway toll-like receptor 3 signaling pathway toll-like receptor 4 signaling pathway negative regulation of epidermal growth factor receptor signaling pathway regulation of apoptosis positive regulation of I-kappaB kinase/NF-kappaB cascade innate immune response nerve growth factor receptor signaling pathway T cell receptor signaling pathway positive regulation of NF-kappaB transcription factor activity stress-activated MAPK cascade negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle nucleotide-binding oligomerization domain containing signaling pathway |
Parkinson's disease |
32203_at |
RBCK1 |
RanBP-type and C3HC4-type zinc finger containing 1 |
20 |
388709 |
AA160708 |
10616 |
20p13 |
Hs.247280 |
24 |
protein polyubiquitination DNA binding ubiquitin-protein ligase activity protein kinase C binding protein binding intracellular zinc ion binding ligase activity negative regulation of NF-kappaB transcription factor activity positive regulation of NF-kappaB import into nucleus positive regulation of apoptosis positive regulation of I-kappaB kinase/NF-kappaB cascade positive regulation of I-kappaB kinase/NF-kappaB cascade ubiquitin binding proteasomal ubiquitin-dependent protein catabolic process interspecies interaction between organisms metal ion binding T cell receptor signaling pathway positive regulation of NF-kappaB transcription factor activity LUBAC complex protein linear polyubiquitination |
|
35450_s_at |
|
|
|
|
U77948 |
|
|
|
|
DNA binding sequence-specific DNA binding transcription factor activity protein binding nucleus cytoplasm transcription, DNA-dependent regulation of transcription, DNA-dependent transcription from RNA polymerase II promoter transcription initiation from RNA polymerase II promoter signal transduction negative regulation of angiogenesis |
|
38952_s_at |
COL13A1 |
collagen, type XIII, alpha 1 |
10 |
71561644 |
M33653 |
1305 |
10q22 |
Hs.695934 |
22 |
morphogenesis of a branching structure endochondral ossification extracellular matrix structural constituent protein binding collagen collagen type XIII plasma membrane cell-cell junction cell-matrix adhesion multicellular organismal development heparin binding integral to membrane cell-cell adhesion cell differentiation |
|
39597_at |
ABLIM3 |
actin binding LIM protein family, member 3 |
5 |
148521054 |
AB020650 |
22885 |
5q32 |
Hs.49688 |
15 |
actin binding cytoplasm cytoskeleton organization axon guidance zinc ion binding positive regulation of transcription from RNA polymerase II promoter metal ion binding |
Axon guidance |
36130_f_at |
MT1E |
metallothionein 1E |
16 |
56659585 |
M10942 |
4493 |
16q13 |
Hs.534330 |
24 |
copper ion binding cytoplasm biological_process zinc ion binding cadmium ion binding metal ion binding |
|
33430_at |
C18orf10 |
chromosome 18 open reading frame 10 |
18 |
-34376034 |
AA143321 |
25941 |
18q12.2 |
Hs.436636 |
5 |
cytoplasm cytoskeleton microtubule |
|
33235_at |
NAV3 |
neuron navigator 3 |
12 |
78225069 |
AB023155 |
89795 |
12q14.3 |
Hs.655301 |
16 |
nucleotide binding ATP binding nucleus nuclear outer membrane membrane nucleoside-triphosphatase activity |
|
39040_at |
UBE2J1 |
ubiquitin-conjugating enzyme E2, J1, U |
6 |
-90036345 |
W28360 |
51465 |
6q15 |
Hs.163776 |
16 |
nucleotide binding ubiquitin-protein ligase activity ATP binding endoplasmic reticulum endoplasmic reticulum membrane membrane integral to membrane ligase activity acid-amino acid ligase activity |
Ubiquitin mediated proteolysis Protein processing in endoplasmic reticulum Parkinson's disease |
37486_f_at |
MEIS3P1 |
Meis homeobox 3 pseudogene 1 |
17 |
15690164 |
U68385 |
4213 |
17p12 |
Hs.356135 |
4 |
sequence-specific DNA binding transcription factor activity nucleus sequence-specific DNA binding |
|
757_at |
ANXA2 |
annexin A2 |
15 |
-60639352, -60639351 |
D28364 |
302 |
15q22.2 |
Hs.511605 |
185 |
skeletal system development angiogenesis phospholipase inhibitor activity calcium ion binding protein binding calcium-dependent phospholipid binding phosphatidylinositol-4,5-bisphosphate binding extracellular region basement membrane soluble fraction cytoplasm early endosome plasma membrane body fluid secretion cytoskeletal protein binding Rab GTPase binding extrinsic to plasma membrane collagen fibril organization midbody positive regulation of vesicle fusion sarcolemma melanosome fibrinolysis protein complex perinuclear region of cytoplasm positive regulation of binding cellular response to acid |
|